Different modes of engagement with the nucleosome acidic patch yield distinct functional outcomes.

Publication Type Academic Article
Authors Chakraborty U, Saccone E, Cruz-Becerra G, Khan L, Arslanovic N, Aguilar R, Gloor S, Hunt S, Folkwein H, Husby N, Maier K, Marunde M, Schomburg N, Vaidya A, Cowles M, Venters B, Kassavetis G, Sun Z, Kadonaga J, Armache J, Keogh M, Tyler J
Journal Nucleic Acids Res
Volume 54
Issue 13
Date Published 07/03/2026
ISSN 1362-4962
Keywords Nucleosomes, Saccharomyces cerevisiae, Saccharomyces cerevisiae Proteins, Nuclear Proteins
Abstract The nucleosome acidic patch is a hub of coordinated engagement by proteins that regulate genomic function. Here, we report that Saccharomyces cerevisiae Dot5 contains an arginine-rich HMGN-like motif that mediates nucleosome acidic patch binding and is required for the cell growth, DNA repair, and heterochromatin defects exhibited when the protein is overexpressed. The heterologous expression of camelid single-chain antibodies to the nucleosome acidic patch confers a similar range of phenotypes, with the most severe observed when an "arginine-anchor" mode of binding analogous to many endogenous factors is employed. This highlights a delicate balance between nucleosome acidic patch interactors critical for normal cellular function and dysregulated in disease.
DOI 10.1093/nar/gkag693
PubMed ID 42423308
PubMed Central ID PMC13347269
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