Nucleotide-dependent conformational changes direct peptide export by the transporter associated with antigen processing.

Publication Type Academic Article
Authors Lee J, Manon V, Chen J
Journal Immunity
Volume 58
Issue 9
Pagination 2166-2175.e4
Date Published 08/29/2025
ISSN 1097-4180
Keywords Antigen Presentation, Peptides, ATP-Binding Cassette Transporters, Nucleotides
Abstract The transporter associated with antigen processing (TAP) delivers peptide antigens from the cytoplasm into the endoplasmic reticulum (ER) for loading onto major histocompatibility complex class I (MHC-I) molecules. To examine the mechanisms of peptide transport and release into the ER, we determined cryo-electron microscopy structures of the human TAP heterodimer in multiple functional states along the transport cycle. In the inward-facing conformation, when the peptide translocation cavity within the TAP heterodimer is exposed to the cytosol, ATP binding strengthened intradomain assembly. Transition to the outward-facing conformation, when the transporter opens to the ER lumen, led to a complete reconfiguration of the peptide-binding site, facilitating peptide release. ATP hydrolysis opened the catalytically active nucleotide-binding consensus site, and the subsequent separation of the nucleotide-binding domains reset the transport cycle. These findings establish a comprehensive structural framework for understanding unilateral peptide transport, vanadate trapping, and trans-inhibition-an internal feedback mechanism that prevents excessive peptide accumulation and activation of the ER stress response.
DOI 10.1016/j.immuni.2025.08.003
PubMed ID 40885191
PubMed Central ID PMC12422388
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