A post-translational regulatory map of chronic antigen-driven human T cell dysfunction.

Publication Type Preprint
Authors Kojima H, Wayne C, Somarribas Patterson L, Sanford H, Chen T, Lin Y, Schoenfeld J, McGary L, Chen Y, Kropp K, Zhang B, Rahman J, Zhang T, Ropek N, Roberts C, Ai Y, Menon K, Hakimi A, Lyu J, Klebanoff C, Abdel-Wahab O, Vardhana S, Vinogradova E
Journal bioRxiv
Date Published 03/06/2026
ISSN 2692-8205
Abstract T cells exposed to persistent antigen in the context of chronic viral infections or cancer lose self-renewal and cytotoxic capacity. Several transcriptional, epigenetic, and metabolic drivers of this process have been identified. However, the post-transcriptional regulatory mechanisms influencing the proteome of dysfunctional T cells are not well understood. Here we present a time-resolved molecular landscape of human T cells during the development of chronic antigen-driven dysfunction. Persistent T cell receptor stimulation significantly remodeled the proteome, including changes in canonical T cell exhaustion-associated proteins and proteins related to mitochondrial function, redox homeostasis, nucleotide metabolism, and cell-cycle progression. Dysfunctional T cells displayed activation of stress response pathways that were recapitulated in vivo; targeting these pathways altered the cytotoxic capacity of T cells during persistent tumor exposure. Our comprehensive proteomic resource reveals unique post-transcriptional changes in dysfunctional T cells and lays the groundwork for novel cysteine-directed therapeutics to enhance cancer immunotherapy.
DOI 10.64898/2026.03.04.709614
PubMed ID 41846950
PubMed Central ID PMC12991124
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